How is Benjamini-Hochberg calculated?
Thus, to calculate the Benjamini-Hochberg critical value for each p-value, we can use the following formula: (i/20)*0.2 where i = rank of p-value. The test with the largest p-value that is less than its Benjamini-Hochberg critical value is Variable #11, which has a p-value of 0.039 and a B-H critical value of 0.040.
How is FDR calculated?
FDR = E(V/R | R > 0) P(R > 0)
- You have at least one rejected hypothesis,
- The probability of getting at least one rejected hypothesis is greater than zero.
What is Benjamini-Hochberg method?
The Benjamini–Hochberg method controls the False Discovery Rate (FDR) using sequential modified Bonferroni correction for multiple hypothesis testing.
What is the Benjamini Hochberg method for correcting for multiple p values?
Background: the Benjamini-Hochberg procedure is a method for correcting for multiple p-values. (If you set p<.05, and you do 20 tests, then one test is likely to be a false positive.
Which is the most significant Benjamini Hochberg test?
The following table shows the Benjamini-Hochberg critical value for each individual p-value: The test with the largest p-value that is less than its Benjamini-Hochberg critical value is Variable #11, which has a p-value of 0.039 and a B-H critical value of 0.040. Thus, this test and all tests with a smaller p-value will be considered significant.
Which is more conservative Benjamini Hochberg or Benjamini Yekutieli?
This test is more conservative than the Benjamini-Hochberg test. Example 2: Repeat Example 1 of Dealing with Familywise Error using the Benjamini-Yekutieli method.
Which is the largest p value in Hochberg’s test?
The formulas in column S are identical to those used in column M of Figure 1 of Holm’s and Hochberg’s Tests. Since the largest p-value for which pi < (i/k)α is i = 5 (i.e. p5 =.03329 < .041667), we conclude that all but test 6 (i.e. C) are significant.